SMN1

ENSG00000172062
Target class
Epigenetic regulator
Chromosome
5
Approved drugs
1
Clinical candidates (approved and in development)
1

Approved drugs
1
Clinical candidates (approved and in development)
1

Chemical probe available
Yes

Target name
SMN1
Gene name
Survival of motor neuron 1, telomeric
Gene symbol
SMN1
Protein name
Survival motor neuron protein (Component of gems 1) (Gemin-1)

  • BCD541
  • SMNT
  • SMA1
  • SMA2
  • SMA3
  • GEMIN1
  • TDRD16A

  • SMA

Gene biotype
Protein coding
Gene family
Tudor domain containing|SMN complex|Proteins encoded by multiple genes
Target class
Epigenetic regulator
Target type
Human gene

Tissues expressed in
53
Protein localisation evidence grade
Supported
Highest tissue expression
8.25
Tissue specificity (Gini)
0.244
Tissue specificity (tau)
0.517

Protein interaction confidence
0.87316
Protein interaction partners
50

  • hsa:6606
  • hsa:6607

  • R-HSA-191859
  • R-HSA-9754678

End position
70953942
Start position
70925030
Chromosome
5
Strand
Forward

Ensembl gene ID
ENSG00000172062
HGNC ID
NCBI Gene ID
6606
UniProt ID
Q16637

  • Nucleus, gem . Nucleus, Cajal body . Cytoplasm . Cytoplasmic granule . Perikaryon . Cell projection, neuron projection . Cell projection, axon . Cytoplasm, myofibril, sarcomere, Z line . Note=Colocalizes with actin and at the Z-line of skeletal muscle (By similarity). Under stress conditions colocalizes with RPP20/POP7 in punctuated cytoplasmic granules (PubMed:14715275). Colocalized and redistributed with ZPR1 from the cytoplasm to nuclear gems (Gemini of coiled bodies) and Cajal bodies (PubMed:11283611). Colocalizes with FMR1 in cytoplasmic granules in the soma and neurite cell processes (PubMed:18093976). .
  • Cytosol
  • Nuclear bodies

Tissue specificity (tau)
0.517439
Expression inequality (Gini)
0.244496

Expression in transcripts per million

Ovary
8.25
Cells - EBV-transformed lymphocytes
7.77
Cervix - Ectocervix
7.7
Cervix - Endocervix
7.57
Uterus
6.82

Expression in transcripts per million

  • Ovary8.25
  • Cells - EBV-transformed lymphocytes7.77
  • Cervix - Ectocervix7.7
  • Cervix - Endocervix7.57
  • Uterus6.82
  • Fallopian Tube6.52
  • Nerve - Tibial6.44
  • Testis5.98
  • Thyroid5.61
  • Vagina5.59
  • Cells - Cultured fibroblasts5.55
  • Brain - Cerebellar Hemisphere5.49
  • Pituitary5.46
  • Prostate5.21
  • Artery - Tibial4.99
  • Bladder4.98
  • Breast - Mammary Tissue4.86
  • Adipose - Visceral (Omentum)4.75
  • Colon - Sigmoid4.61
  • Adipose - Subcutaneous4.58
  • Lung4.55
  • Artery - Coronary4.39
  • Artery - Aorta4.3
  • Skin - Not Sun Exposed (Suprapubic)4.24
  • Brain - Cerebellum4.12

And 29 more, listed on the interactive page.

Related records

Trials (111)

Drugs (1)