SCN3A

ENSG00000153253
Target class
Ion channel
Chromosome
2
Approved drugs
51
Clinical candidates (approved and in development)
58

Approved drugs
51
ClinGen gene-disease validity
Definitive
Clinical candidates (approved and in development)
58

Chemical probe available
No

Other names
  • Nav1.3
Target name
SCN3A
Gene name
Sodium voltage-gated channel alpha subunit 3
Gene symbol
SCN3A
Protein name
Sodium channel protein type 3 subunit alpha (Sodium channel protein brain III subunit alpha) (Sodium channel protein type III subunit alpha) (Voltage-gated sodium channel subtype III) (Voltage-gated sodium channel subunit alpha Nav1.3)

Gene biotype
Protein coding
Gene family
Sodium voltage-gated channel alpha subunits
Target class
Ion channel
Target type
Human gene

Tissues expressed in
26
Highest tissue expression
12.98
Tissue specificity (Gini)
0.604
Tissue specificity (tau)
0.84

KEGG gene identifiers
  • hsa:6328
Protein interaction confidence
0.849
Protein interaction partners
15

  • R-HSA-445095
  • R-HSA-5576892
  • R-HSA-9717207

End position
165204050
Start position
165087526
Chromosome
2
Strand
Reverse

Ensembl gene ID
ENSG00000153253
HGNC ID
NCBI Gene ID
6328
UniProt ID
Q9NY46

  • Cell membrane
  • Multi-pass membrane protein . Basal cell membrane
  • Multi-pass membrane protein . Note=In enterochromaffin cells, localized highly asymmetrically, almost exclusively at the basal side. .

Tissue specificity (tau)
0.840015
Expression inequality (Gini)
0.604272

Expression in transcripts per million

Brain - Cerebellar Hemisphere
12.98
Brain - Cerebellum
11.34
Brain - Hypothalamus
9.29
Brain - Nucleus accumbens (basal ganglia)
8.5
Pituitary
8.07

Expression in transcripts per million

  • Brain - Cerebellar Hemisphere12.98
  • Brain - Cerebellum11.34
  • Brain - Hypothalamus9.29
  • Brain - Nucleus accumbens (basal ganglia)8.5
  • Pituitary8.07
  • Brain - Frontal Cortex (BA9)6.45
  • Brain - Cortex5.76
  • Brain - Anterior cingulate cortex (BA24)5.21
  • Brain - Caudate (basal ganglia)5.14
  • Brain - Amygdala3.93
  • Brain - Putamen (basal ganglia)3.45
  • Brain - Hippocampus3.38
  • Testis3.22
  • Brain - Substantia nigra3.04
  • Artery - Coronary2.63
  • Brain - Spinal cord (cervical c-1)2.12
  • Thyroid1.96
  • Artery - Tibial1.73
  • Adipose - Subcutaneous1.73
  • Nerve - Tibial1.68
  • Artery - Aorta1.54
  • Uterus1.41
  • Adipose - Visceral (Omentum)1.31
  • Small Intestine - Terminal Ileum1.27
  • Breast - Mammary Tissue1.26

And 29 more, listed on the interactive page.

Biological processes

Molecular functions

Related records

Trials (4,157)

Drugs (83)